The file contains the list of all node pairs predicted as edges by any method. Columns 1 and 2 correspond to the node names. Column 3 corresponds to the number of methods that predict the given node pair as an edge. Column 4 contains a “1” if the node pair is a “new predicted edge” (predicted edge not present in the original network) and a “0” otherwise. Columns 5-9 list the rankings of the given node pair by the different methods (the same methods as in Fig. 3(A) of the main paper); if the given node pair is not predicted as an edge by a given method, a ‘-’ appears. The three tabs in the file correspond to the three analyzed networks: AP/MS, HC, and Y2H.